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Table 1 Dissociation constants for the binding of tRNAfMet and tRNAPhe to different ribosomal complexes

From: Guanine-nucleotide exchange on ribosome-bound elongation factor G initiates the translocation of tRNAs

Set

State

Peptide

Codon in the E site

tRNA

Dissociation constant KD (nM)

Additional factors; temperature

1

PreT

fMI

Thr (ACG)

fMet

144 ± 7

37°C

     

179 ± 14

EF-G + GTP; 37°C

     

770 ± 80

EF-G + GDP; 37°C

     

40 ± 2

EF-G + GDPNP; 37°C

2

PostT

fMI

Met (AUG)

fMet

153 ± 9

37°C

    

Phe

250 ± 30

 
  

fM

Phe (UUU)

fMet

295 ± 26

 
    

Phe

84 ± 11

 
  

fMFTI

Thr (ACG)

fMet

162 ± 5

 
    

Phe

134 ± 20

 

3

PostT

fMI

Met (AUG)

fMet

155 ± 10

+ RelE (A-site cut); 37°C

4

PostT

fMI

Met (AUG)

fMet

24.8 ± 1.2

0°C

  1. Different conditions were used for measuring the dissociation constants for the different combinations of tRNA and ribosomal complexes as inFigure 7, and are shown in the last column.